Dorina Meneghini (ehemals Lenz)

Wissenschaftliche Mitarbeiterin

Bioinformatik

Abteilung für Evolutionsgenetik

Tel: 0049 (0) 30 5168 - 340
E-Mail: meneghini@izw-berlin.de

Kurzer Lebenslauf

I have a Bachelor’s degree in Computer Science and a Master’s degree in Bioinformatics, and since 2010 I am working as a Bioinformatician. My professional bioinformatics career started at LGC Genomics GmbH in Berlin, and in 2013 I returned from the company to the academic science at IZW.

Bioinformatics data analysis of high-throughput sequencing (HTS) data is the focus of my current position, including raw sequence data of various sequencers. I have broad experience in analysing HTS data, including the assembly of transcriptome and genome data, resequencing projects, and complex and customized downstream analyses.

Since my employment at LGC Genomics I was the replacement of the position of the system administrator, so I also gained knowledge in server administration and server backup. At IZW I am co-administrator of the FG2 Linux server, taking care of server

maintenance tasks including performing data backups. I have experience with maintenance and further development of database applications: at LGC Genomics I was responsible for the Laboratory Information Management System (LIMS), including a MySQL database, and the company's web shop; at IZW I was responsible for the development of a new database on archival material, including data migration to a PostgreSQL database.

Currently I am involved and provide support in the field of sequence bioinformatics and software engineering.

Projekte
Forschungsinteressen

bioinformatics analysis of high-throughput sequencing (HTS) data

Ausgewählte Publikationen
Weyrich A, Lenz D, Fickel J (2019): Environmental change-dependent transgenerational epigenetic response. Genes 10(1), 4.
 
Förster DW, Bull JK , Lenz D, Autenrieth M, Paijmans LAJ, Kraus RHS, Nowak C, Bayerl H, Kuehn R, Saveljev AP, Sindičić M , Hofreiter M, Schmidt K, Fickel J (2018): Targeted resequencing of coding DNA sequences for SNP discovery in nonmodel species. Mol Ecol Resour., 1–18.
Lazarus D, Renaudie J, Lenz D, Diver P, Klump J (2018) Raritas and RaritasVox: Programs for counting high diversity categorical data with highly unequal abundances. PeerJ, 6:e5453.
 
Martins RF, Schmidt A, Lenz D, Wilting A, Fickel J (2018) Human-mediated introduction of introgressed deer across Wallace's line: Historical biogeography of Rusa unicolor and R. timorensis. Ecol Evol. Published online 2017 Dec 27;8(3):1465-1479.
 
Weyrich A, Jeschek M, Schrapers KT, Lenz D, Chung H, Rübensam K, Yasar S, Schneemann M, Ortman S, Jewgenow K, Fickel J (2018): Diet changes alter paternally inherited epigenetic pattern in male Wild guinea pigs. Environmental Epigenetics 4(2): In Progress
 
Mohd Salleh F, Ramos-Madrigal J, Peñaloza F, Liu S, Mikkel-Holger SS, Riddhi PP, Martins R, Lenz D, Fickel J, Roos C, Shamsir MS, Azman MS, Burton KL, Stephen JR, Wilting A, Gilbert MTP (2017) An expanded mammal mitogenome dataset from Southeast Asia. Gigascience. 2017 Aug 1;6(8):1-8.
 
Martins RF, Fickel J, Le M, van Nguyen T, Nguyen HM, Timmins R, Gan HM, Rovie-Ryan JJ, Lenz D, Förster DW, Wilting A (2017) Phylogeography of red muntjacs reveals three distinct mitochondrial lineages. BMC Evol Biol. 2017 Jan 26;17(1):34.
 
Patel RP, Wutke S, Lenz D, Mukherjee S, Ramakrishnan U, Veron G, Fickel J, Wilting A, Förster DW (2017) Genetic Structure and Phylogeography of the Leopard Cat (Prionailurus bengalensis) Inferred from Mitochondrial Genomes. J Hered. 2017 Jun 1;108(4):349-360.
 
Cui P, Löber U, Alquezar-Planas DE, Ishida Y, Courtiol A, Timms P, Johnson RN, Lenz D, Helgen KM, Roca AL, Hartman S, Greenwood AD (2016) Comprehensive profiling of retroviral integration sites using target enrichment methods from historical koala samples without an assembled reference genome. PeerJ. 2016 Mar 28;4:e1847.
 
Slater GJ, Cui P, Forasiepi AM, Lenz D, Tsangaras K, Voirin B, de Moraes-Barros N, MacPhee RD, Greenwood AD (2016) Evolutionary Relationships among Extinct and Extant Sloths: The Evidence of Mitogenomes and Retroviruses. Genome Biol Evol. 2016 Feb 14;8(3):607-21.
 
Weyrich A, Lenz D, Jeschek M, Chung TH, Rübensam K, Göritz F, Jewgenow K, Fickel J (2016) Paternal intergenerational epigenetic response to heat exposure in male Wild guinea pigs. Mol Ecol. 2016 Apr;25(8):1729-40.
 
Zuletzt aktualisiert am 24. Januar 2019.